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<li class="navelem"><a class="el" href="dir_3dc1dabd28ba78e072d14d3fcfc90454.html">SPHINXsys</a></li><li class="navelem"><a class="el" href="dir_48ea983704c43b6d88c1fa3f4d09e369.html">src</a></li><li class="navelem"><a class="el" href="dir_0a0d9ef1793521534f0094f317758287.html">shared</a></li><li class="navelem"><a class="el" href="dir_18bd2fbc0c396aa3503f5e750d6566c2.html">particles</a></li>  </ul>
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<a href="base__particles_8h.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="comment">/* -------------------------------------------------------------------------*</span></div><div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="comment"> *                              SPHinXsys                                   *</span></div><div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="comment"> * --------------------------------------------------------------------------*</span></div><div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="comment"> * SPHinXsys (pronunciation: s&#39;finksis) is an acronym from Smoothed Particle    *</span></div><div class="line"><a name="l00005"></a><span class="lineno">    5</span>&#160;<span class="comment"> * Hydrodynamics for industrial compleX systems. It provides C++ APIs for   *</span></div><div class="line"><a name="l00006"></a><span class="lineno">    6</span>&#160;<span class="comment"> * physical accurate simulation and aims to model coupled industrial dynamic *</span></div><div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;<span class="comment"> * systems including fluid, solid, multi-body dynamics and beyond with SPH  *</span></div><div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160;<span class="comment"> * (smoothed particle hydrodynamics), a meshless computational method using *</span></div><div class="line"><a name="l00009"></a><span class="lineno">    9</span>&#160;<span class="comment"> * particle discretization.                                                 *</span></div><div class="line"><a name="l00010"></a><span class="lineno">   10</span>&#160;<span class="comment"> *                                                                          *</span></div><div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="comment"> * SPHinXsys is partially funded by German Research Foundation              *</span></div><div class="line"><a name="l00012"></a><span class="lineno">   12</span>&#160;<span class="comment"> * (Deutsche Forschungsgemeinschaft) DFG HU1527/6-1, HU1527/10-1                *</span></div><div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;<span class="comment"> * and HU1527/12-1.                                                         *</span></div><div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160;<span class="comment"> *                                                                           *</span></div><div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;<span class="comment"> * Portions copyright (c) 2017-2020 Technical University of Munich and      *</span></div><div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;<span class="comment"> * the authors&#39; affiliations.                                               *</span></div><div class="line"><a name="l00017"></a><span class="lineno">   17</span>&#160;<span class="comment"> *                                                                           *</span></div><div class="line"><a name="l00018"></a><span class="lineno">   18</span>&#160;<span class="comment"> * Licensed under the Apache License, Version 2.0 (the &quot;License&quot;); you may   *</span></div><div class="line"><a name="l00019"></a><span class="lineno">   19</span>&#160;<span class="comment"> * not use this file except in compliance with the License. You may obtain a *</span></div><div class="line"><a name="l00020"></a><span class="lineno">   20</span>&#160;<span class="comment"> * copy of the License at http://www.apache.org/licenses/LICENSE-2.0.        *</span></div><div class="line"><a name="l00021"></a><span class="lineno">   21</span>&#160;<span class="comment"> *                                                                           *</span></div><div class="line"><a name="l00022"></a><span class="lineno">   22</span>&#160;<span class="comment"> * --------------------------------------------------------------------------*/</span></div><div class="line"><a name="l00031"></a><span class="lineno">   31</span>&#160;<span class="preprocessor">#ifndef BASE_PARTICLES_H</span></div><div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160;<span class="preprocessor">#define BASE_PARTICLES_H</span></div><div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;</div><div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160;<span class="preprocessor">#include &quot;base_data_package.h&quot;</span></div><div class="line"><a name="l00035"></a><span class="lineno">   35</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="sph__data__containers_8h.html">sph_data_containers.h</a>&quot;</span></div><div class="line"><a name="l00036"></a><span class="lineno">   36</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="base__material_8h.html">base_material.h</a>&quot;</span></div><div class="line"><a name="l00037"></a><span class="lineno">   37</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="xml__engine_8h.html">xml_engine.h</a>&quot;</span></div><div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;</div><div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160;<span class="preprocessor">#include &lt;fstream&gt;</span></div><div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;</div><div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;<span class="keyword">namespace </span><a class="code" href="namespace_s_p_h.html">SPH</a></div><div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;{</div><div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160;</div><div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160;    <span class="keyword">class </span>SPHBody;</div><div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160;    <span class="keyword">class </span>BaseMaterial;</div><div class="line"><a name="l00046"></a><span class="lineno">   46</span>&#160;    <span class="keyword">class </span>ParticleGenerator;</div><div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160;    <span class="keyword">class </span>BodySurface;</div><div class="line"><a name="l00048"></a><span class="lineno">   48</span>&#160;    <span class="keyword">template</span> &lt;<span class="keyword">class</span> ReturnType&gt;</div><div class="line"><a name="l00049"></a><span class="lineno">   49</span>&#160;    <span class="keyword">class </span>ParticleDynamics;</div><div class="line"><a name="l00050"></a><span class="lineno">   50</span>&#160;</div><div class="line"><a name="l00081"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1_base_particles.html">   81</a></span>&#160;    <span class="keyword">class </span><a class="code" href="class_s_p_h_1_1_base_particles.html">BaseParticles</a></div><div class="line"><a name="l00082"></a><span class="lineno">   82</span>&#160;    {</div><div class="line"><a name="l00083"></a><span class="lineno">   83</span>&#160;    <span class="keyword">private</span>:</div><div class="line"><a name="l00084"></a><span class="lineno">   84</span>&#160;        <a class="code" href="class_s_p_h_1_1_unique_ptr_keepers.html">UniquePtrKeepers&lt;ParticleDynamics&lt;void&gt;</a>&gt; derived_particle_data_;</div><div class="line"><a name="l00085"></a><span class="lineno">   85</span>&#160;</div><div class="line"><a name="l00086"></a><span class="lineno">   86</span>&#160;    <span class="keyword">public</span>:</div><div class="line"><a name="l00087"></a><span class="lineno">   87</span>&#160;        <span class="keyword">explicit</span> <a class="code" href="class_s_p_h_1_1_base_particles.html">BaseParticles</a>(<a class="code" href="class_s_p_h_1_1_s_p_h_body.html">SPHBody</a> &amp;sph_body, <a class="code" href="class_s_p_h_1_1_base_material.html">BaseMaterial</a> *base_material);</div><div class="line"><a name="l00088"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1_base_particles.html#a7295d70f30a8f65b371cca7da78b80f5">   88</a></span>&#160;        <span class="keyword">virtual</span> ~<a class="code" href="class_s_p_h_1_1_base_particles.html">BaseParticles</a>(){};</div><div class="line"><a name="l00089"></a><span class="lineno">   89</span>&#160;</div><div class="line"><a name="l00090"></a><span class="lineno">   90</span>&#160;        <a class="code" href="class_std_large_vec_3_01_vecd_01_4.html">StdLargeVec&lt;Vecd&gt;</a> <a class="code" href="class_s_p_h_1_1_base_particles.html#a7295d70f30a8f65b371cca7da78b80f5">pos_</a>;       </div><div class="line"><a name="l00091"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1_base_particles.html#a375faa3312de4b7c7f2dcd4f4246ca21">   91</a></span>&#160;        <a class="code" href="class_std_large_vec_3_01_vecd_01_4.html">StdLargeVec&lt;Vecd&gt;</a> <a class="code" href="class_s_p_h_1_1_base_particles.html#a375faa3312de4b7c7f2dcd4f4246ca21">vel_</a>;       </div><div class="line"><a name="l00092"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1_base_particles.html#adfd85d8e658a2c995109875d22c96335">   92</a></span>&#160;        <a class="code" href="class_std_large_vec_3_01_vecd_01_4.html">StdLargeVec&lt;Vecd&gt;</a> <a class="code" href="class_s_p_h_1_1_base_particles.html#adfd85d8e658a2c995109875d22c96335">acc_</a>;       </div><div class="line"><a name="l00093"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1_base_particles.html#ab3d08b76c0cd34db43cf0c39df1153ee">   93</a></span>&#160;        <a class="code" href="class_std_large_vec_3_01_vecd_01_4.html">StdLargeVec&lt;Vecd&gt;</a> <a class="code" href="class_s_p_h_1_1_base_particles.html#ab3d08b76c0cd34db43cf0c39df1153ee">acc_prior_</a>; </div><div class="line"><a name="l00095"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1_base_particles.html#aeff9ca6449d936cf70a2ace2fb9d92d2">   95</a></span>&#160;        <a class="code" href="class_std_large_vec_3_01_real_01_4.html">StdLargeVec&lt;Real&gt;</a> <a class="code" href="class_s_p_h_1_1_base_particles.html#aeff9ca6449d936cf70a2ace2fb9d92d2">Vol_</a>;  </div><div class="line"><a name="l00096"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1_base_particles.html#a7b269617b5aa18940a5e6b3f4cf36f0c">   96</a></span>&#160;        <a class="code" href="class_std_large_vec_3_01_real_01_4.html">StdLargeVec&lt;Real&gt;</a> <a class="code" href="class_s_p_h_1_1_base_particles.html#a7b269617b5aa18940a5e6b3f4cf36f0c">rho_</a>;  </div><div class="line"><a name="l00097"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1_base_particles.html#a02c7fc3468dcf92154a1a60c2a170e1a">   97</a></span>&#160;        <a class="code" href="class_std_large_vec_3_01_real_01_4.html">StdLargeVec&lt;Real&gt;</a> <a class="code" href="class_s_p_h_1_1_base_particles.html#a02c7fc3468dcf92154a1a60c2a170e1a">mass_</a>; </div><div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;        <span class="comment">//----------------------------------------------------------------------</span></div><div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;        <span class="comment">// Global information for all particles</span></div><div class="line"><a name="l00100"></a><span class="lineno">  100</span>&#160;        <span class="comment">//----------------------------------------------------------------------</span></div><div class="line"><a name="l00101"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1_base_particles.html#a181f99605f02cf585423de652b1e5356">  101</a></span>&#160;        Real <a class="code" href="class_s_p_h_1_1_base_particles.html#a181f99605f02cf585423de652b1e5356">rho0_</a>;             </div><div class="line"><a name="l00102"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1_base_particles.html#a2f19352151ca345493379a57ad5d02aa">  102</a></span>&#160;        Real <a class="code" href="class_s_p_h_1_1_base_particles.html#a2f19352151ca345493379a57ad5d02aa">sigma0_</a>;           </div><div class="line"><a name="l00103"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1_base_particles.html#ac5c08c3a1026bfd96469e902ebb9e934">  103</a></span>&#160;        Real <a class="code" href="class_s_p_h_1_1_base_particles.html#ac5c08c3a1026bfd96469e902ebb9e934">speed_max_</a>;        </div><div class="line"><a name="l00104"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1_base_particles.html#ab8225845e6682236f4c7b11c162f76f3">  104</a></span>&#160;        Real <a class="code" href="class_s_p_h_1_1_base_particles.html#ab8225845e6682236f4c7b11c162f76f3">signal_speed_max_</a>; </div><div class="line"><a name="l00105"></a><span class="lineno">  105</span>&#160;        <span class="comment">//----------------------------------------------------------------------</span></div><div class="line"><a name="l00106"></a><span class="lineno">  106</span>&#160;        <span class="comment">// Global information for defining particle groups</span></div><div class="line"><a name="l00107"></a><span class="lineno">  107</span>&#160;        <span class="comment">//----------------------------------------------------------------------</span></div><div class="line"><a name="l00108"></a><span class="lineno">  108</span>&#160;        <span class="keywordtype">size_t</span> total_real_particles_;</div><div class="line"><a name="l00109"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1_base_particles.html#a0501a7ad45113b5e671704ed6537c0fb">  109</a></span>&#160;        <span class="keywordtype">size_t</span> <a class="code" href="class_s_p_h_1_1_base_particles.html#a0501a7ad45113b5e671704ed6537c0fb">real_particles_bound_</a>; </div><div class="line"><a name="l00110"></a><span class="lineno">  110</span>&#160;        <span class="keywordtype">size_t</span> total_ghost_particles_;</div><div class="line"><a name="l00111"></a><span class="lineno">  111</span>&#160;        <span class="comment">//----------------------------------------------------------------------</span></div><div class="line"><a name="l00112"></a><span class="lineno">  112</span>&#160;        <span class="comment">//      Generalized particle data for parameterized management</span></div><div class="line"><a name="l00113"></a><span class="lineno">  113</span>&#160;        <span class="comment">//----------------------------------------------------------------------</span></div><div class="line"><a name="l00114"></a><span class="lineno">  114</span>&#160;        <a class="code" href="namespace_s_p_h.html#a5b64e4def11be4e4b77d1f2768fd56b1">ParticleData</a> all_particle_data_;</div><div class="line"><a name="l00115"></a><span class="lineno">  115</span>&#160;        <a class="code" href="namespace_s_p_h.html#ad964bd16bd649c1ee72aa32164405435">ParticleDataMap</a> all_variable_maps_;</div><div class="line"><a name="l00116"></a><span class="lineno">  116</span>&#160;        StdVec&lt;ParticleDynamics&lt;void&gt; *&gt; derived_variables_;</div><div class="line"><a name="l00117"></a><span class="lineno">  117</span>&#160;        <a class="code" href="namespace_s_p_h.html#a058f422301dc6671883a7ca3ef568075">ParticleVariableList</a> variables_to_write_;</div><div class="line"><a name="l00118"></a><span class="lineno">  118</span>&#160;</div><div class="line"><a name="l00120"></a><span class="lineno">  120</span>&#160;        <span class="keyword">template</span> &lt;<span class="keyword">typename</span> VariableType&gt;</div><div class="line"><a name="l00121"></a><span class="lineno">  121</span>&#160;        <span class="keywordtype">void</span> <a class="code" href="class_s_p_h_1_1_base_particles.html#a20ff30ccd36baf7ef398eda84ae4fbfb">registerVariable</a>(StdLargeVec&lt;VariableType&gt; &amp;variable_addrs,</div><div class="line"><a name="l00122"></a><span class="lineno">  122</span>&#160;                              <span class="keyword">const</span> std::string &amp;variable_name, <a class="code" href="class_variable_type.html">VariableType</a> initial_value = <a class="code" href="class_variable_type.html">VariableType</a>(0));</div><div class="line"><a name="l00123"></a><span class="lineno">  123</span>&#160;</div><div class="line"><a name="l00125"></a><span class="lineno">  125</span>&#160;        <span class="keyword">template</span> &lt;<span class="keyword">typename</span> VariableType, <span class="keyword">class</span> InitializationFunction&gt;</div><div class="line"><a name="l00126"></a><span class="lineno">  126</span>&#160;        <span class="keywordtype">void</span> <a class="code" href="class_s_p_h_1_1_base_particles.html#a20ff30ccd36baf7ef398eda84ae4fbfb">registerVariable</a>(StdLargeVec&lt;VariableType&gt; &amp;variable_addrs, <span class="keyword">const</span> std::string &amp;variable_name,</div><div class="line"><a name="l00127"></a><span class="lineno">  127</span>&#160;                              <span class="keyword">const</span> InitializationFunction &amp;initialization);</div><div class="line"><a name="l00128"></a><span class="lineno">  128</span>&#160;</div><div class="line"><a name="l00130"></a><span class="lineno">  130</span>&#160;        <span class="keyword">template</span> &lt;<span class="keyword">typename</span> VariableType&gt;</div><div class="line"><a name="l00131"></a><span class="lineno">  131</span>&#160;        StdLargeVec&lt;VariableType&gt; *<a class="code" href="class_s_p_h_1_1_base_particles.html#a23aec0689b553745b32bd7fc5f10ebcf">getVariableByName</a>(<span class="keyword">const</span> std::string &amp;variable_name);</div><div class="line"><a name="l00132"></a><span class="lineno">  132</span>&#160;</div><div class="line"><a name="l00134"></a><span class="lineno">  134</span>&#160;        <span class="keyword">template</span> &lt;<span class="keyword">typename</span> VariableType&gt;</div><div class="line"><a name="l00135"></a><span class="lineno">  135</span>&#160;        <span class="keywordtype">void</span> <a class="code" href="class_s_p_h_1_1_base_particles.html#ae080065cf7016057c3051df22632dd78">addVariableNameToList</a>(<a class="code" href="namespace_s_p_h.html#a058f422301dc6671883a7ca3ef568075">ParticleVariableList</a> &amp;variable_name_list, <span class="keyword">const</span> std::string &amp;variable_name);</div><div class="line"><a name="l00136"></a><span class="lineno">  136</span>&#160;</div><div class="line"><a name="l00138"></a><span class="lineno">  138</span>&#160;        <span class="keyword">template</span> &lt;<span class="keyword">typename</span> VariableType&gt;</div><div class="line"><a name="l00139"></a><span class="lineno">  139</span>&#160;        <span class="keywordtype">void</span> <a class="code" href="class_s_p_h_1_1_base_particles.html#a2cfb6e65da80894160a9b35bcec60ae4">addVariableToWrite</a>(<span class="keyword">const</span> std::string &amp;variable_name);</div><div class="line"><a name="l00140"></a><span class="lineno">  140</span>&#160;</div><div class="line"><a name="l00142"></a><span class="lineno">  142</span>&#160; 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       <a class="code" href="struct_s_p_h_1_1_data_assemble_operation.html">DataAssembleOperation&lt;copyAParticleDataValue&gt;</a> copy_a_particle_value_;</div><div class="line"><a name="l00238"></a><span class="lineno">  238</span>&#160;    };</div><div class="line"><a name="l00239"></a><span class="lineno">  239</span>&#160;</div><div class="line"><a name="l00240"></a><span class="lineno"><a class="line" href="struct_s_p_h_1_1_write_a_particle_variable_to_xml.html">  240</a></span>&#160;    <span class="keyword">struct </span><a class="code" href="struct_s_p_h_1_1_write_a_particle_variable_to_xml.html">WriteAParticleVariableToXml</a></div><div class="line"><a name="l00241"></a><span class="lineno">  241</span>&#160;    {</div><div class="line"><a name="l00242"></a><span class="lineno">  242</span>&#160;        <a class="code" href="class_s_p_h_1_1_xml_engine.html">XmlEngine</a> &amp;xml_engine_;</div><div class="line"><a name="l00243"></a><span class="lineno">  243</span>&#160;        <span class="keywordtype">size_t</span> &amp;total_real_particles_;</div><div class="line"><a name="l00244"></a><span class="lineno">  244</span>&#160;        <a class="code" href="struct_s_p_h_1_1_write_a_particle_variable_to_xml.html">WriteAParticleVariableToXml</a>(<a class="code" href="class_s_p_h_1_1_xml_engine.html">XmlEngine</a> &amp;xml_engine, <span class="keywordtype">size_t</span> &amp;total_real_particles)</div><div class="line"><a name="l00245"></a><span class="lineno">  245</span>&#160;            : xml_engine_(xml_engine), total_real_particles_(total_real_particles){};</div><div class="line"><a name="l00246"></a><span class="lineno">  246</span>&#160;</div><div class="line"><a name="l00247"></a><span class="lineno">  247</span>&#160;        <span class="keyword">template</span> &lt;<span class="keyword">typename</span> VariableType&gt;</div><div class="line"><a name="l00248"></a><span class="lineno">  248</span>&#160;        <span class="keywordtype">void</span> operator()(std::string &amp;variable_name, StdLargeVec&lt;VariableType&gt; &amp;variable) <span class="keyword">const</span>;</div><div class="line"><a name="l00249"></a><span class="lineno">  249</span>&#160;    };</div><div class="line"><a name="l00250"></a><span class="lineno">  250</span>&#160;</div><div class="line"><a name="l00251"></a><span class="lineno"><a class="line" href="struct_s_p_h_1_1_read_a_particle_variable_from_xml.html">  251</a></span>&#160;    <span class="keyword">struct </span><a class="code" href="struct_s_p_h_1_1_read_a_particle_variable_from_xml.html">ReadAParticleVariableFromXml</a></div><div class="line"><a name="l00252"></a><span class="lineno">  252</span>&#160;    {</div><div class="line"><a name="l00253"></a><span class="lineno">  253</span>&#160;        <a class="code" href="class_s_p_h_1_1_xml_engine.html">XmlEngine</a> &amp;xml_engine_;</div><div class="line"><a name="l00254"></a><span class="lineno">  254</span>&#160;        <span class="keywordtype">size_t</span> &amp;total_real_particles_;</div><div class="line"><a name="l00255"></a><span class="lineno">  255</span>&#160;        <a class="code" href="struct_s_p_h_1_1_read_a_particle_variable_from_xml.html">ReadAParticleVariableFromXml</a>(<a class="code" href="class_s_p_h_1_1_xml_engine.html">XmlEngine</a> &amp;xml_engine, <span class="keywordtype">size_t</span> &amp;total_real_particles)</div><div class="line"><a name="l00256"></a><span class="lineno">  256</span>&#160;            : xml_engine_(xml_engine), total_real_particles_(total_real_particles){};</div><div class="line"><a name="l00257"></a><span class="lineno">  257</span>&#160;</div><div class="line"><a name="l00258"></a><span class="lineno">  258</span>&#160;        <span class="keyword">template</span> &lt;<span class="keyword">typename</span> VariableType&gt;</div><div class="line"><a name="l00259"></a><span class="lineno">  259</span>&#160;        <span class="keywordtype">void</span> operator()(std::string &amp;variable_name, StdLargeVec&lt;VariableType&gt; &amp;variable) <span class="keyword">const</span>;</div><div class="line"><a name="l00260"></a><span class="lineno">  260</span>&#160;    };</div><div class="line"><a name="l00261"></a><span class="lineno">  261</span>&#160;</div><div class="line"><a name="l00266"></a><span class="lineno">  266</span>&#160;    <span class="keyword">template</span> &lt;<span class="keyword">typename</span> VariableType&gt;</div><div class="line"><a name="l00267"></a><span class="lineno"><a class="line" href="class_s_p_h_1_1_base_derived_variable.html">  267</a></span>&#160;    <span class="keyword">class </span><a class="code" href="class_s_p_h_1_1_base_derived_variable.html">BaseDerivedVariable</a></div><div class="line"><a name="l00268"></a><span class="lineno">  268</span>&#160;    {</div><div class="line"><a name="l00269"></a><span class="lineno">  269</span>&#160;    <span class="keyword">public</span>:</div><div class="line"><a name="l00270"></a><span class="lineno">  270</span>&#160;        <span class="keyword">using</span> <a class="code" href="class_variable_type.html">DerivedVariableType</a> = <a class="code" href="class_variable_type.html">VariableType</a>;</div><div class="line"><a name="l00271"></a><span class="lineno">  271</span>&#160;        std::string variable_name_;</div><div class="line"><a name="l00272"></a><span class="lineno">  272</span>&#160;</div><div class="line"><a name="l00273"></a><span class="lineno">  273</span>&#160;        <a class="code" href="class_s_p_h_1_1_base_derived_variable.html">BaseDerivedVariable</a>(<span class="keyword">const</span> <a class="code" href="class_s_p_h_1_1_s_p_h_body.html">SPHBody</a> &amp;sph_body, <span class="keyword">const</span> std::string &amp;variable_name);</div><div class="line"><a name="l00274"></a><span class="lineno">  274</span>&#160;        <span class="keyword">virtual</span> ~<a class="code" href="class_s_p_h_1_1_base_derived_variable.html">BaseDerivedVariable</a>(){};</div><div class="line"><a name="l00275"></a><span class="lineno">  275</span>&#160;</div><div class="line"><a name="l00276"></a><span class="lineno">  276</span>&#160;    <span class="keyword">protected</span>:</div><div class="line"><a name="l00277"></a><span class="lineno">  277</span>&#160;        StdLargeVec&lt;VariableType&gt; derived_variable_;</div><div class="line"><a name="l00278"></a><span class="lineno">  278</span>&#160;    };</div><div class="line"><a name="l00279"></a><span class="lineno">  279</span>&#160;}</div><div class="line"><a name="l00280"></a><span class="lineno">  280</span>&#160;<span class="preprocessor">#endif // BASE_PARTICLES_H</span></div><div class="ttc" id="class_std_large_vec_3_01_real_01_4_html"><div class="ttname"><a href="class_std_large_vec_3_01_real_01_4.html">StdLargeVec&lt; Real &gt;</a></div></div>
<div class="ttc" id="struct_s_p_h_1_1_base_particles_1_1resize_particle_data_html"><div class="ttname"><a href="struct_s_p_h_1_1_base_particles_1_1resize_particle_data.html">SPH::BaseParticles::resizeParticleData</a></div><div class="ttdef"><b>Definition:</b> base_particles.h:216</div></div>
<div class="ttc" id="class_variable_type_html"><div class="ttname"><a href="class_variable_type.html">VariableType</a></div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html">SPH::BaseParticles</a></div><div class="ttdoc">Particles with essential (geometric and kinematic) data. There are three types of particles， all par...</div><div class="ttdef"><b>Definition:</b> base_particles.h:81</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a7b269617b5aa18940a5e6b3f4cf36f0c"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a7b269617b5aa18940a5e6b3f4cf36f0c">SPH::BaseParticles::rho_</a></div><div class="ttdeci">StdLargeVec&lt; Real &gt; rho_</div><div class="ttdef"><b>Definition:</b> base_particles.h:96</div></div>
<div class="ttc" id="class_s_p_h_1_1_body_surface_html"><div class="ttname"><a href="class_s_p_h_1_1_body_surface.html">SPH::BodySurface</a></div><div class="ttdoc">A body part with the collection of particles at surface of a body. </div><div class="ttdef"><b>Definition:</b> base_body_part.h:138</div></div>
<div class="ttc" id="struct_s_p_h_1_1_read_a_particle_variable_from_xml_html"><div class="ttname"><a href="struct_s_p_h_1_1_read_a_particle_variable_from_xml.html">SPH::ReadAParticleVariableFromXml</a></div><div class="ttdef"><b>Definition:</b> base_particles.h:251</div></div>
<div class="ttc" id="namespace_s_p_h_html_a058f422301dc6671883a7ca3ef568075"><div class="ttname"><a href="namespace_s_p_h.html#a058f422301dc6671883a7ca3ef568075">SPH::ParticleVariableList</a></div><div class="ttdeci">std::array&lt; StdVec&lt; std::pair&lt; std::string, size_t &gt; &gt;, 4 &gt; ParticleVariableList</div><div class="ttdef"><b>Definition:</b> sph_data_containers.h:63</div></div>
<div class="ttc" id="namespace_s_p_h_html_a5b64e4def11be4e4b77d1f2768fd56b1"><div class="ttname"><a href="namespace_s_p_h.html#a5b64e4def11be4e4b77d1f2768fd56b1">SPH::ParticleData</a></div><div class="ttdeci">GeneralDataAssemble&lt; StdLargeVec &gt; ParticleData</div><div class="ttdef"><b>Definition:</b> sph_data_containers.h:59</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_ac96046bf3b861b37906230aa21d2ba20"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#ac96046bf3b861b37906230aa21d2ba20">SPH::BaseParticles::registerSortableVariable</a></div><div class="ttdeci">void registerSortableVariable(const std::string &amp;variable_name)</div><div class="ttdef"><b>Definition:</b> base_particles.hpp:143</div></div>
<div class="ttc" id="struct_s_p_h_1_1_data_assemble_operation_html"><div class="ttname"><a href="struct_s_p_h_1_1_data_assemble_operation.html">SPH::DataAssembleOperation</a></div><div class="ttdef"><b>Definition:</b> base_data_package.h:46</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a1d0cb79785e5188e1f2b9e3669f59014"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a1d0cb79785e5188e1f2b9e3669f59014">SPH::BaseParticles::initializeOtherVariables</a></div><div class="ttdeci">virtual void initializeOtherVariables()</div><div class="ttdef"><b>Definition:</b> base_particles.cpp:39</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_material_html"><div class="ttname"><a href="class_s_p_h_1_1_base_material.html">SPH::BaseMaterial</a></div><div class="ttdoc">Base of all materials. </div><div class="ttdef"><b>Definition:</b> base_material.h:52</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a02c7fc3468dcf92154a1a60c2a170e1a"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a02c7fc3468dcf92154a1a60c2a170e1a">SPH::BaseParticles::mass_</a></div><div class="ttdeci">StdLargeVec&lt; Real &gt; mass_</div><div class="ttdef"><b>Definition:</b> base_particles.h:97</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_af56c3d9d2de8bcd3811c77689101a352"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#af56c3d9d2de8bcd3811c77689101a352">SPH::BaseParticles::writeParticlesToPltFile</a></div><div class="ttdeci">void writeParticlesToPltFile(std::ofstream &amp;output_file)</div><div class="ttdef"><b>Definition:</b> base_particles.cpp:188</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_ab3d08b76c0cd34db43cf0c39df1153ee"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#ab3d08b76c0cd34db43cf0c39df1153ee">SPH::BaseParticles::acc_prior_</a></div><div class="ttdeci">StdLargeVec&lt; Vecd &gt; acc_prior_</div><div class="ttdef"><b>Definition:</b> base_particles.h:93</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a53df32cd5bc52913befbf42b8ea2a38a"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a53df32cd5bc52913befbf42b8ea2a38a">SPH::BaseParticles::addVariableToRestart</a></div><div class="ttdeci">void addVariableToRestart(const std::string &amp;variable_name)</div><div class="ttdef"><b>Definition:</b> base_particles.hpp:131</div></div>
<div class="ttc" id="xml__engine_8h_html"><div class="ttname"><a href="xml__engine_8h.html">xml_engine.h</a></div><div class="ttdoc">XML class for xml input and output, this is GUI of simbody xml parser. </div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a212677c0639ebcbbf103413ee46071ff"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a212677c0639ebcbbf103413ee46071ff">SPH::BaseParticles::sph_body_</a></div><div class="ttdeci">SPHBody * sph_body_</div><div class="ttdef"><b>Definition:</b> base_particles.h:203</div></div>
<div class="ttc" id="class_std_large_vec_3_01_vecd_01_4_html"><div class="ttname"><a href="class_std_large_vec_3_01_vecd_01_4.html">StdLargeVec&lt; Vecd &gt;</a></div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a375faa3312de4b7c7f2dcd4f4246ca21"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a375faa3312de4b7c7f2dcd4f4246ca21">SPH::BaseParticles::vel_</a></div><div class="ttdeci">StdLargeVec&lt; Vecd &gt; vel_</div><div class="ttdef"><b>Definition:</b> base_particles.h:91</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a6739f4e03d20c54ddec15395764aae3a"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a6739f4e03d20c54ddec15395764aae3a">SPH::BaseParticles::addVariableToReload</a></div><div class="ttdeci">void addVariableToReload(const std::string &amp;variable_name)</div><div class="ttdef"><b>Definition:</b> base_particles.hpp:137</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_aa0950e37924b6605910d07adab37228a"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#aa0950e37924b6605910d07adab37228a">SPH::BaseParticles::writeSurfaceParticlesToVtuFile</a></div><div class="ttdeci">virtual void writeSurfaceParticlesToVtuFile(std::ostream &amp;output_file, BodySurface &amp;surface_particles)</div><div class="ttdef"><b>Definition:</b> base_particles.cpp:207</div></div>
<div class="ttc" id="base__material_8h_html"><div class="ttname"><a href="base__material_8h.html">base_material.h</a></div><div class="ttdoc">This is the base classes of all materials. A function in a derived material class returns a value wit...</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a7a07ff11234c5ec58ff67bbc4251f489"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a7a07ff11234c5ec58ff67bbc4251f489">SPH::BaseParticles::insertAGhostParticle</a></div><div class="ttdeci">size_t insertAGhostParticle(size_t index_i)</div><div class="ttdef"><b>Definition:</b> base_particles.cpp:100</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a23aec0689b553745b32bd7fc5f10ebcf"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a23aec0689b553745b32bd7fc5f10ebcf">SPH::BaseParticles::getVariableByName</a></div><div class="ttdeci">StdLargeVec&lt; VariableType &gt; * getVariableByName(const std::string &amp;variable_name)</div><div class="ttdef"><b>Definition:</b> base_particles.hpp:74</div></div>
<div class="ttc" id="struct_s_p_h_1_1_base_particles_1_1add_a_particle_data_value_html"><div class="ttname"><a href="struct_s_p_h_1_1_base_particles_1_1add_a_particle_data_value.html">SPH::BaseParticles::addAParticleDataValue</a></div><div class="ttdef"><b>Definition:</b> base_particles.h:223</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a2cfb6e65da80894160a9b35bcec60ae4"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a2cfb6e65da80894160a9b35bcec60ae4">SPH::BaseParticles::addVariableToWrite</a></div><div class="ttdeci">void addVariableToWrite(const std::string &amp;variable_name)</div><div class="ttdef"><b>Definition:</b> base_particles.hpp:116</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a20ff30ccd36baf7ef398eda84ae4fbfb"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a20ff30ccd36baf7ef398eda84ae4fbfb">SPH::BaseParticles::registerVariable</a></div><div class="ttdeci">void registerVariable(StdLargeVec&lt; VariableType &gt; &amp;variable_addrs, const std::string &amp;variable_name, VariableType initial_value=VariableType(0))</div><div class="ttdef"><b>Definition:</b> base_particles.hpp:40</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_aea34869099d4e659b9e375c96bb1f7f1"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#aea34869099d4e659b9e375c96bb1f7f1">SPH::BaseParticles::addDerivedVariableToWrite</a></div><div class="ttdeci">void addDerivedVariableToWrite()</div><div class="ttdef"><b>Definition:</b> base_particles.hpp:122</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_aeff9ca6449d936cf70a2ace2fb9d92d2"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#aeff9ca6449d936cf70a2ace2fb9d92d2">SPH::BaseParticles::Vol_</a></div><div class="ttdeci">StdLargeVec&lt; Real &gt; Vol_</div><div class="ttdef"><b>Definition:</b> base_particles.h:95</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a181f99605f02cf585423de652b1e5356"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a181f99605f02cf585423de652b1e5356">SPH::BaseParticles::rho0_</a></div><div class="ttdeci">Real rho0_</div><div class="ttdef"><b>Definition:</b> base_particles.h:101</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_adfd85d8e658a2c995109875d22c96335"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#adfd85d8e658a2c995109875d22c96335">SPH::BaseParticles::acc_</a></div><div class="ttdeci">StdLargeVec&lt; Vecd &gt; acc_</div><div class="ttdef"><b>Definition:</b> base_particles.h:92</div></div>
<div class="ttc" id="class_s_p_h_1_1_unique_ptr_keepers_html"><div class="ttname"><a href="class_s_p_h_1_1_unique_ptr_keepers.html">SPH::UniquePtrKeepers</a></div><div class="ttdoc">A wrapper to provide an ownership for a vector of base class pointers which point to derived objects...</div><div class="ttdef"><b>Definition:</b> ownership.h:127</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_derived_variable_html"><div class="ttname"><a href="class_s_p_h_1_1_base_derived_variable.html">SPH::BaseDerivedVariable</a></div><div class="ttdoc">computing displacement from current and initial particle position </div><div class="ttdef"><b>Definition:</b> base_particles.h:267</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_ae080065cf7016057c3051df22632dd78"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#ae080065cf7016057c3051df22632dd78">SPH::BaseParticles::addVariableNameToList</a></div><div class="ttdeci">void addVariableNameToList(ParticleVariableList &amp;variable_name_list, const std::string &amp;variable_name)</div><div class="ttdef"><b>Definition:</b> base_particles.hpp:89</div></div>
<div class="ttc" id="sph__data__containers_8h_html"><div class="ttname"><a href="sph__data__containers_8h.html">sph_data_containers.h</a></div><div class="ttdoc">Set up of basic data structure. </div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a9791271d7da2a1266a2853b6158b2b14"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a9791271d7da2a1266a2853b6158b2b14">SPH::BaseParticles::sequence_</a></div><div class="ttdeci">StdLargeVec&lt; size_t &gt; sequence_</div><div class="ttdef"><b>Definition:</b> base_particles.h:158</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_ab8225845e6682236f4c7b11c162f76f3"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#ab8225845e6682236f4c7b11c162f76f3">SPH::BaseParticles::signal_speed_max_</a></div><div class="ttdeci">Real signal_speed_max_</div><div class="ttdef"><b>Definition:</b> base_particles.h:104</div></div>
<div class="ttc" id="class_s_p_h_1_1_s_p_h_body_html"><div class="ttname"><a href="class_s_p_h_1_1_s_p_h_body.html">SPH::SPHBody</a></div><div class="ttdoc">SPHBody is a base body with basic data and functions. Its derived class can be a real fluid body...</div><div class="ttdef"><b>Definition:</b> base_body.h:61</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a29f483536ec24b55b5a86579dbfb6406"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a29f483536ec24b55b5a86579dbfb6406">SPH::BaseParticles::writeParticlesToVtk</a></div><div class="ttdeci">void writeParticlesToVtk(OutStreamType &amp;output_stream)</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a0501a7ad45113b5e671704ed6537c0fb"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a0501a7ad45113b5e671704ed6537c0fb">SPH::BaseParticles::real_particles_bound_</a></div><div class="ttdeci">size_t real_particles_bound_</div><div class="ttdef"><b>Definition:</b> base_particles.h:109</div></div>
<div class="ttc" id="namespace_s_p_h_html_ad964bd16bd649c1ee72aa32164405435"><div class="ttname"><a href="namespace_s_p_h.html#ad964bd16bd649c1ee72aa32164405435">SPH::ParticleDataMap</a></div><div class="ttdeci">std::array&lt; std::map&lt; std::string, size_t &gt;, 4 &gt; ParticleDataMap</div><div class="ttdef"><b>Definition:</b> sph_data_containers.h:61</div></div>
<div class="ttc" id="class_s_p_h_1_1_xml_engine_html"><div class="ttname"><a href="class_s_p_h_1_1_xml_engine.html">SPH::XmlEngine</a></div><div class="ttdef"><b>Definition:</b> xml_engine.h:56</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_ac5c08c3a1026bfd96469e902ebb9e934"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#ac5c08c3a1026bfd96469e902ebb9e934">SPH::BaseParticles::speed_max_</a></div><div class="ttdeci">Real speed_max_</div><div class="ttdef"><b>Definition:</b> base_particles.h:103</div></div>
<div class="ttc" id="struct_s_p_h_1_1_base_particles_1_1copy_a_particle_data_value_html"><div class="ttname"><a href="struct_s_p_h_1_1_base_particles_1_1copy_a_particle_data_value.html">SPH::BaseParticles::copyAParticleDataValue</a></div><div class="ttdef"><b>Definition:</b> base_particles.h:230</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_ab304f934ce3fda6317fdc21a169ed8d7"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#ab304f934ce3fda6317fdc21a169ed8d7">SPH::BaseParticles::unsorted_id_</a></div><div class="ttdeci">StdLargeVec&lt; size_t &gt; unsorted_id_</div><div class="ttdef"><b>Definition:</b> base_particles.h:156</div></div>
<div class="ttc" id="struct_s_p_h_1_1_write_a_particle_variable_to_xml_html"><div class="ttname"><a href="struct_s_p_h_1_1_write_a_particle_variable_to_xml.html">SPH::WriteAParticleVariableToXml</a></div><div class="ttdef"><b>Definition:</b> base_particles.h:240</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a2f19352151ca345493379a57ad5d02aa"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a2f19352151ca345493379a57ad5d02aa">SPH::BaseParticles::sigma0_</a></div><div class="ttdeci">Real sigma0_</div><div class="ttdef"><b>Definition:</b> base_particles.h:102</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a7295d70f30a8f65b371cca7da78b80f5"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a7295d70f30a8f65b371cca7da78b80f5">SPH::BaseParticles::pos_</a></div><div class="ttdeci">StdLargeVec&lt; Vecd &gt; pos_</div><div class="ttdef"><b>Definition:</b> base_particles.h:88</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a73e49d0ece770a2640cee40cf7642a6b"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a73e49d0ece770a2640cee40cf7642a6b">SPH::BaseParticles::sorted_id_</a></div><div class="ttdeci">StdLargeVec&lt; size_t &gt; sorted_id_</div><div class="ttdef"><b>Definition:</b> base_particles.h:157</div></div>
<div class="ttc" id="namespace_s_p_h_html"><div class="ttname"><a href="namespace_s_p_h.html">SPH</a></div><div class="ttdef"><b>Definition:</b> solid_body_supplementary.cpp:9</div></div>
<div class="ttc" id="class_s_p_h_1_1_base_particles_html_a3fdbe46eced55a94598719ad444e7a92"><div class="ttname"><a href="class_s_p_h_1_1_base_particles.html#a3fdbe46eced55a94598719ad444e7a92">SPH::BaseParticles::getKernelGradient</a></div><div class="ttdeci">virtual Vecd getKernelGradient(size_t index_i, size_t index_j, Real dW_ij, Vecd &amp;e_ij)</div><div class="ttdef"><b>Definition:</b> base_particles.h:193</div></div>
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